ncRNA ID | novel_zma_miR11403 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:25728630-25728755 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 21 |
Mature sequence(if miRNA) | 106 - CAAAUUAUAGGUUGUUUGGCU - 126 |
Stem-loop(if miRNA) |
--             --G          -C      C          C    CGC            CAAAUUAUAGGUU   UUUGGCUUUU  UGGAUA AUAGUUUUUG UAUG   CUAGAUAUAC   |||||||||||||   ||||||||||  |||||| |||||||||| ||||   |||||||||A   GUUUAAUAUCCAG   AAACCGAAAA  AUCUAU UGUUAAAAAU AUGC   GAUCUGUAUA AG             UAA          AU      U          A    AUA          |
Stem-loop sequence | CAAAUUAUAGGUUGUUUGGCUUUUCUGGAUACAUAGUUUUUGCUAUGCGCCUAGAUAUACAAUAUGUCUAGAUACGUAAUAAAAAUUGUUUAUCUAUAAAAAGCCAAAAAUGACCUAUAAUUUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT069084.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0166C16 mRNA, complete cds | NA | coding protein | psRNATarget |