Search result

BaseInfo

ncRNA ID novel_zma_miR11403
Species Zea mays
Class miRNA
Genome position Chr1:25728630-25728755 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 21
Mature sequence(if miRNA) 106 - CAAAUUAUAGGUUGUUUGGCU - 126
Stem-loop(if miRNA) --             --G          -C      C          C    CGC         
  CAAAUUAUAGGUU   UUUGGCUUUU  UGGAUA AUAGUUUUUG UAUG   CUAGAUAUAC
  |||||||||||||   ||||||||||  |||||| |||||||||| ||||   |||||||||A
  GUUUAAUAUCCAG   AAACCGAAAA  AUCUAU UGUUAAAAAU AUGC   GAUCUGUAUA
AG             UAA          AU      U          A    AUA         
Stem-loop sequence CAAAUUAUAGGUUGUUUGGCUUUUCUGGAUACAUAGUUUUUGCUAUGCGCCUAGAUAUACAAUAUGUCUAGAUACGUAAUAAAAAUUGUUUAUCUAUAAAAAGCCAAAAAUGACCUAUAAUUUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069084.1
ncRNA:21   UCGGUUUGUUGGAUAUUAAAC   1
  |*|||*=|||||||||||||*
targets:753   AUCCAUGCAACCUAUAAUUUU   773

3.0 Zea mays full-length cDNA clone ZM_BFb0166C16 mRNA, complete cds NA coding protein psRNATarget