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BaseInfo

ncRNA ID novel_zma_miR11402
Species Zea mays
Class miRNA
Genome position Chr8:145124857-145124931 [-]
Reference genome RefGen_v4
Source SRR1997865;SRR5451006
Length 24
Mature sequence(if miRNA) 1 - GGUUGAAGAGUAGAAUAAAGCGGA - 24
Stem-loop(if miRNA) --U   C      -  G  UG  -        U    U
   GUU UAUUCU CU UU  GC AAGCAGAA AUAG C
   ||| |||||| || ||  || |||||||| |||| A
   CGA AUAAGA GA AA  UG UUUGUUUU UAUC C
AGG   A      U  G  GU  G        U    U
Stem-loop sequence UGUUCUAUUCUCUGUUUGGCAAGCAGAAUAUAGUCACUCUAUUUUUUGUUUGGUUGAAGAGUAGAAUAAAGCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945197.1
ncRNA:24   AGGCGAAAUAAGAUGAGAAGUUGG   1
  ||||||*|||||||||||||||||
targets:106   UCCGCUCUAUUCUACUCUUCAACC   129

1.0 Zea mays clone 244184 mRNA sequence NA coding protein psRNATarget
BT084215.2
ncRNA:24   AGGCGAAAUAAGAUGAGAAGUUGG   1
  |||*||*||||||||||||||||*
targets:1038   UCCACUCUAUUCUACUCUUCAACG   1061

2.0 Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds NA coding protein psRNATarget