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BaseInfo

ncRNA ID novel_zma_miR11399
Species Zea mays
Class miRNA
Genome position Chr1:40914476-40914645 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AUCCCCGUCGGCCAAGUACUAGCC - 24
Stem-loop(if miRNA) --    -  CA          A U    A    U -      A   U  A   A -    U AGU    G    -UC         CC
  UUGG AC  GGCCGACGGG G UAAG CUUA C CCCGUU GCC AC UGG C GACG G   UAAG CUUA   CCCGUCGGC  A
  |||| ||  |||||||||| | |||| |||| | |||||| ||| || ||| | |||| |   |||| ||||   |||||||||  C
  GAUC UG  CCGGCUGCCC C AUUC GAAU G GGGCAA CGG UG ACC G CUGC C   AUUC GAAU   GGGCAGCCG  A
CC    A  AA          - U    G    U A      C   -  C   C A    U -GU    G    UAA         AU
Stem-loop sequence UUGGACCAGGCCGACGGGAGUUAAGACUUAUCCCCGUUAGCCUACAUGGACGACGUGAGUUAAGGCUUAUCCCCGUCGGCCCACAUAGCCGACGGGAAUUAAGGCUUAUGCUCGUCAGCCCACGUGGCCAACGGGAGUUAAGGCUUAUCCCCGUCGGCCAAGUACUAGCC