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BaseInfo

ncRNA ID	novel_zma_miR11398
Species	Zea mays
Class	miRNA
Genome position	Chr1:51456819-51456965 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	124 - CUAGUAGCGGUUUUCUUAAGGAAC - 147
Stem-loop(if miRNA)	--                C                   C                         G  G        UCCUUAAGAAAACCGC ACUAGAAAUCGUAUUUCUA UGGCGGUUCCUUAAGAAAACCGCCA UA AAAUCC   |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| || |||||A   AGGAAUUCUUUUGGCG UGAUCUUUAGCAUAAAGAU ACCGCCAAGGAAUUCUUUUGGCGGU AU UUUAGU CA                A                   C                         G  G
Stem-loop sequence	UCCUUAAGAAAACCGCCACUAGAAAUCGUAUUUCUACUGGCGGUUCCUUAAGAAAACCGCCAGUAGAAAUCCAUGAUUUGUAGUGGCGGUUUUCUUAAGGAACCGCCACUAGAAAUACGAUUUCUAGUAGCGGUUUUCUUAAGGAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235227.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   ||||||||||||||||||*||||| targets:66   GUUCCUUAAGAAAACCGCCACUAG   89 Target Full Sequence	1.5	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget
HI403097.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   ||||||||||||||||||*||||| targets:66   GUUCCUUAAGAAAACCGCCACUAG   89 Target Full Sequence	1.5	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget
JB163558.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   ||||||||||||||||||*||||| targets:66   GUUCCUUAAGAAAACCGCCACUAG   89 Target Full Sequence	1.5	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget
JB163546.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   ||||||||||||||||||*||||| targets:5   GUUCCUUAAGAAAACCGCCACUAG   28 Target Full Sequence	1.5	Sequence 1210 from Patent EP2559767	NA	coding protein	psRNATarget
HI403085.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   ||||||||||||||||||*||||| targets:5   GUUCCUUAAGAAAACCGCCACUAG   28 Target Full Sequence	1.5	Sequence 1210 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235215.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   ||||||||||||||||||*||||| targets:5   GUUCCUUAAGAAAACCGCCACUAG   28 Target Full Sequence	1.5	Sequence 1210 from Patent EP2985353	NA	coding protein	psRNATarget
HI403059.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   |||=||||||||||||||*||||| targets:5   GUUUCUUAAGAAAACCGCCACUAG   28 Target Full Sequence	1.5	Sequence 1184 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235189.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   |||=||||||||||||||*||||| targets:5   GUUUCUUAAGAAAACCGCCACUAG   28 Target Full Sequence	1.5	Sequence 1184 from Patent EP2985353	NA	coding protein	psRNATarget
JB163520.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   |||=||||||||||||||*||||| targets:5   GUUUCUUAAGAAAACCGCCACUAG   28 Target Full Sequence	1.5	Sequence 1184 from Patent EP2559767	NA	coding protein	psRNATarget
HI405882.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   |||=*|||||||||||||*||||| targets:27   GUUUAUUAAGAAAACCGCCACUAG   50 Target Full Sequence	1.5	Sequence 4007 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238012.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   |||=*|||||||||||||*||||| targets:27   GUUUAUUAAGAAAACCGCCACUAG   50 Target Full Sequence	1.5	Sequence 4007 from Patent EP2985353	NA	coding protein	psRNATarget
JB166343.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   |||=*|||||||||||||*||||| targets:27   GUUUAUUAAGAAAACCGCCACUAG   50 Target Full Sequence	1.5	Sequence 4007 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   |||=*|||||||||||||*||||| targets:5   GUUUAUUAAGAAAACCGCCACUAG   28 Target Full Sequence	1.5	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
JB163447.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   |||=*|||||||||||||*||||| targets:5   GUUUAUUAAGAAAACCGCCACUAG   28 Target Full Sequence	1.5	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget
HI402986.1	ncRNA:24   CAAGGAAUUCUUUUGGCGAUGAUC   1   |||=*|||||||||||||*||||| targets:5   GUUUAUUAAGAAAACCGCCACUAG   28 Target Full Sequence	1.5	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget