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BaseInfo

ncRNA ID	novel_zma_miR11380
Species	Zea mays
Class	miRNA
Genome position	Chr10:113255448-113255499 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	29 - AGACACUCGGCAAAGGUAACUCUU - 52
Stem-loop(if miRNA)	--A             A      GUC    AGUUACCUUUGCC AGUGUU   G    ||||||||||||| ||||||    UCAAUGGAAACGG UCACAG   G UUC             C      ACG
Stem-loop sequence	AAGUUACCUUUGCCAAGUGUUGUCGGGCAGACACUCGGCAAAGGUAACUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238769.1	ncRNA:24   UUCU-CAAUGGAAACGGCUCACAGA   1   ||||-|||||||||||||||||||* targets:53   AAGAAGUUACCUUUGCCGAGUGUCA   77 Target Full Sequence	1.0	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   UUCU-CAAUGGAAACGGCUCACAGA   1   ||||-|||||||||||||||||||* targets:53   AAGAAGUUACCUUUGCCGAGUGUCA   77 Target Full Sequence	1.0	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   UUCU-CAAUGGAAACGGCUCACAGA   1   ||||-|||||||||||||||||||* targets:53   AAGAAGUUACCUUUGCCGAGUGUCA   77 Target Full Sequence	1.0	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
HI406492.1	ncRNA:24   UUCUCAAUGGAAACGGCUCACAGA   1   ||-||||**=|||||||||||||| targets:62   AA-AGUUUGUUUUGCCGAGUGUCU   84 Target Full Sequence	3.0	Sequence 4617 from Patent EP2074227	NA	coding protein	psRNATarget
JB166953.1	ncRNA:24   UUCUCAAUGGAAACGGCUCACAGA   1   ||-||||**=|||||||||||||| targets:62   AA-AGUUUGUUUUGCCGAGUGUCU   84 Target Full Sequence	3.0	Sequence 4617 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238622.1	ncRNA:24   UUCUCAAUGGAAACGGCUCACAGA   1   ||-||||**=|||||||||||||| targets:62   AA-AGUUUGUUUUGCCGAGUGUCU   84 Target Full Sequence	3.0	Sequence 4617 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020544825.1	ncRNA:24   UUCUCAAUGGAAACGGCUCACAGA   1   ==**|||||||*|||||||||||* targets:720   GGCCGUUACCUAUGCCGAGUGUCC   743 Target Full Sequence	2.5	PREDICTED: Zea mays probable glutathione S-transferase GSTU6 (LOC103640476), partial mRNA	NA	coding protein	psRNATarget