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BaseInfo

ncRNA ID novel_zma_miR11374
Species Zea mays
Class miRNA
Genome position Chr1:165227104-165227193 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 67 - AAGUAAGAUCUAGCCUGUAUGAGC - 90
Stem-loop(if miRNA) --AA  A    CUA   U    -  GC     ---CA     A   AU
    GU AGAU   GCC GUAU GA  AGAUA     AAAUA GUC  U
    || ||||   ||| |||| ||  |||||     ||||| |||  U
    CG UCUA   CGG CAUA CU  UCUAU     UUUAU CAG  U
CAUA  G    AGG   -    G  -A     AUGAG     -   AA
Stem-loop sequence AAGUAAGAUCUAGCCUGUAUGAGCAGAUACAAAAUAAGUCAUUUUAAGACUAUUUGAGUAUAUCUAUCGAUACGGCGGAAUCUGGCAUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU948630.1
ncRNA:24   CGAGUAUGUCCGAUCUAGAAUGAA   1
  ||||||||||||||||||||||||
targets:317   GCUCAUACAGGCUAGAUCUUACUU   340

0.0 Zea mays clone 381141 mRNA sequence NA coding protein psRNATarget