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BaseInfo

ncRNA ID novel_zma_miR11373
Species Zea mays
Class miRNA
Genome position Chr1:170792416-170792490 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 52 - AGAUUGUAACACCCUGAAUUUGGG - 75
Stem-loop(if miRNA) --   UU       CC         -G    ---U    U
  AGA  GUAACAC  UGAAUUUGG  GGUA    GAAA U
  |||  |||||||  |||||||||  ||||    ||||
  UCU  CAUUGUG  ACUUAAACC  CUAU    CUUU U
UC   CU       -A         AA    UAAU    C
Stem-loop sequence AGAUUGUAACACCCUGAAUUUGGGGGUAUGAAAUUUCUUUCUAAUUAUCAACCAAAUUCAAGUGUUACUCUCUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008669578.2
ncRNA:24   GGGUUU-AAGUCCCACAAUGUUAGA   1
  ||=|||-|||||||||||||||||*
targets:2286   CCUAAAAUUCAGGGUGUUACAAUCG   2310

3.0 PREDICTED: Zea mays uncharacterized LOC100279556 (LOC100279556), transcript variant X1, mRNA NA coding protein psRNATarget