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BaseInfo

ncRNA ID novel_zma_miR11370
Species Zea mays
Class miRNA
Genome position Chr1:190489285-190489328 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 21
Mature sequence(if miRNA) 24 - GAGAUGAAAGAAGUCGCGAGC - 44
Stem-loop(if miRNA) ---GA         A   G   G
     GAUGAAAGA GUC CGA C
     ||||||||| ||| ||| C
     CUACUUUCU CAG GCU G
UAGUC         -   -   G
Stem-loop sequence GAGAUGAAAGAAGUCGCGAGCCGGUCGGACUCUUUCAUCCUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940929.1
ncRNA:21   CGAGCGCUGAAGAAAGUAGAG   1
  |||||||||||||||||||*|
targets:875   GCUCGCGACUUCUUUCAUCAC   895

1.5 Zea mays clone 1215420 mRNA sequence NA coding protein psRNATarget
EU940981.1
ncRNA:21   CGAGCGCUGAAGAAAGUAGAG   1
  |||||||||||||||||||*|
targets:2719   GCUCGCGACUUCUUUCAUCAC   2739

1.5 Zea mays clone 1229106 mRNA sequence NA coding protein psRNATarget
XM_008655143.2
ncRNA:21   CGAGCGCUGAAGAAAGUAGAG   1
  **|||**||||||||||||||
targets:1612   AAUCGAUACUUCUUUCAUCUC   1632

2.0 PREDICTED: Zea mays probable inactive receptor kinase At5g10020 (LOC103633442), mRNA NA coding protein psRNATarget