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BaseInfo

ncRNA ID novel_zma_miR11362
Species Zea mays
Class miRNA
Genome position Chr1:288576735-288576895 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - UGAUCGGACAUGUAACCGUUGCCU - 24
Stem-loop(if miRNA) --     GGA      A       -CUA         A   UUUCCA   --AAUA  CUUUCCCCUACCCAGAGGAACCUUC
  UGAUC   CAUGUA CCGUUGC    GUUGACUAU CAU      CCC      GA                         U
  |||||   |||||| |||||||    ||||||||| |||      |||      ||
  ACUAG   GUGCAU GGCAGCG    CGAUUGGUA GUA      GGG      AC                         U
UC     -AG      C       UGUG         A   -UAACA   AUUCCC  ACGAUGUCUAAUAACUGUUUGAUUC
Stem-loop sequence UGAUCGGACAUGUAACCGUUGCCUAGUUGACUAUACAUUUUCCACCCAAUAGACUUUCCCCUACCCAGAGGAACCUUCUUCUUAGUUUGUCAAUAAUCUGUAGCACACCCUUAGGGACAAUAUGAAUGGUUAGCGUGUGCGACGGCUACGUGGAGAUCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT068667.2
ncRNA:24   UCCGUUGCCAAUGUACAGGCUAGU   1
  ||||||||||||||||||||||||
targets:1073   AGGCAACGGUUACAUGUCCGAUCA   1096

0.0 Zea mays full-length cDNA clone ZM_BFb0354O10 mRNA, complete cds NA coding protein psRNATarget