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BaseInfo

ncRNA ID novel_zma_miR11358
Species Zea mays
Class miRNA
Genome position Chr1:278158183-278158235 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 25
Mature sequence(if miRNA) 29 - ACAGACUUUGCCGAGUGCCAACGGA - 53
Stem-loop(if miRNA) --U  A A             -A    
   GU G GCACUCGGCAAAG  UGUGU
   || | |||||||||||||  ||||U
   CA C CGUGAGCCGUUUC  ACAUC
AGG  A -             AG    
Stem-loop sequence UGUAGAGCACUCGGCAAAGAUGUGUUCUACAGACUUUGCCGAGUGCCAACGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538020.1
ncRNA:25   AG-GCAACCGUGAGCCGUUUCAGACA   1
  ||-||--||||||||||||||||*|*
targets:255   UCGCG--GGCACUCGGCAAAGUCAGG   278

2.5 PREDICTED: Zea mays CASP-like protein 4A1 (LOC109939705), mRNA NA coding protein psRNATarget
XM_020550864.1
ncRNA:25   AG-GCAACCGUGAGCCGUUUCAGACA   1
  ||-||--||||||||||||||||*|*
targets:198   UCACG--GGCACUCGGCAAAGUCAGG   221

2.5 PREDICTED: Zea mays serine/arginine repetitive matrix protein 1-like (LOC109945075), mRNA NA coding protein psRNATarget