Search result

BaseInfo

ncRNA ID novel_zma_miR11354
Species Zea mays
Class miRNA
Genome position Chr1:253269903-253270061 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 21
Mature sequence(if miRNA) 1 - UUUAAAACCGGUUGUUUAACC - 21
Stem-loop(if miRNA) --    A               CA   AC                    --UAACC    GAGCAAU     UGAUG   U
  UUUA AACCGGUUGUUUAAC  CAU  GUUUUACAAAACCAGACAAA       CCGU       UUAGU     GUC U
  |||| |||||||||||||||  |||  ||||||||||||||||||||       ||||       |||||     ||| G
  AAGU UUGGUCAACAAAUUG  GUA  CGAAAUGUUUUGGUCUGUUU       GGCG       AGUUA     CAG A
GG    C               CG   GU                    UGACGUC    --AAUUU     UAGUA   U
Stem-loop sequence UUUAAAACCGGUUGUUUAACCACAUACGUUUUACAAAACCAGACAAAUAACCCCGUGAGCAAUUUAGUUGAUGGUCUUGAUGACAUGAUAUUGAUUUAAGCGGCUGCAGUUUUGUCUGGUUUUGUAAAGCUGAUGGCGUUAAACAACUGGUUCUGAAGG