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BaseInfo

ncRNA ID novel_zma_miR11348
Species Zea mays
Class miRNA
Genome position Chr1:237845340-237845422 [+]
Reference genome RefGen_v4
Source SRR5100248;SRR5105959;SRR5105961
Length 22
Mature sequence(if miRNA) 62 - UUCAGUUUUCUCCAACAUCUUA - 83
Stem-loop(if miRNA) --   -    U             -   --C   GCUAUCUUC
  AGA GUUG AGGAAGCUGAACU CUG   CUC         A
  ||| |||| ||||||||||||| |||   |||         G
  UCU CAAC UCUUUUGACUUGA GAC   GAG         U
AU   A    C             U   UUU   ACACUGCCU
Stem-loop sequence AGAGUUGUAGGAAGCUGAACUCUGCCUCGCUAUCUUCAGUUCCGUCACAGAGUUUCAGUAGUUCAGUUUUCUCCAACAUCUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY112169.1
ncRNA:22   AUUCUACAACCUCUUUUGACUU   1
  ****|||||||||*||||||||
targets:976   CUCUAUGUUGGAGUAAACUGAA   997

2.5 Zea mays CL6349_1 mRNA sequence NA coding protein psRNATarget