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BaseInfo

ncRNA ID novel_zma_miR11346
Species Zea mays
Class miRNA
Genome position Chr1:232238212-232238336 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 22
Mature sequence(if miRNA) 1 - UAUUUCGAGAAAGUUGUGAGAC - 22
Stem-loop(if miRNA) --UA                 GA                          U   CA      CA
    UUUCGAGAAAGUUGUGA  CACUAUGUGUAGAAACCUAGGAGAAC ACA  UGAAAU  U
    |||||||||||||||||  |||||||||||||||||||||||||| |||  ||||||
    AAAGCUCUUUCAACACU  GUGAUACACAUCUUUGGAUUCUCUUG UGU  ACUUUG  A
UUUC                 AC                          C   -A      AG
Stem-loop sequence UAUUUCGAGAAAGUUGUGAGACACUAUGUGUAGAAACCUAGGAGAACUACACAUGAAAUCAUAGAGUUUCAAUGUCGUUCUCUUAGGUUUCUACACAUAGUGCAUCACAACUUUCUCGAAACUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403209.1
ncRNA:22   CAGAGUGUUGAAAGAGCUUUAU   1
  *|*|||||||||||||||||*|
targets:167   AUGUCACAACUUUCUCGAAACA   188

1.5 Sequence 1334 from Patent EP2074227 NA coding protein psRNATarget
LQ235339.1
ncRNA:22   CAGAGUGUUGAAAGAGCUUUAU   1
  *|*|||||||||||||||||*|
targets:167   AUGUCACAACUUUCUCGAAACA   188

1.5 Sequence 1334 from Patent EP2985353 NA coding protein psRNATarget
JB163670.1
ncRNA:22   CAGAGUGUUGAAAGAGCUUUAU   1
  *|*|||||||||||||||||*|
targets:167   AUGUCACAACUUUCUCGAAACA   188

1.5 Sequence 1334 from Patent EP2559767 NA coding protein psRNATarget