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BaseInfo

ncRNA ID	novel_zma_miR11344
Species	Zea mays
Class	miRNA
Genome position	Chr1:229148161-229148275 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	1 - CCUUGUUUGAAUGCACAUGUA - 21
Stem-loop(if miRNA)	-CCU      A    A    U    A  U                         UCC     UGUUUG AUGC CAUG AUCC CC CAAUCCAUGUGUGUUGGGGUGAGUU   A     |||||| |||| |||| |||| || |||||||||||||||||||||||||     ACAAAC UACG GUAC UAGG GG GUUAGGUACACACAACCUCACUUAA   U CCGU      G    G    C    C  U                         CCA
Stem-loop sequence	CCUUGUUUGAAUGCACAUGUAUCCACCUCAAUCCAUGUGUGUUGGGGUGAGUUUCCAUACCAAUUCACUCCAACACACAUGGAUUGUGGCGGAUCCAUGGGCAUGCAAACAUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU964467.1	ncRNA:21   AUGUACACGUAAGUUUGUUCC   1   |=||*||||||||||=||||| targets:870   UGCAAGUGCAUUCAAGCAAGG   890 Target Full Sequence	2.5	Zea mays clone 279088 mRNA sequence	NA	coding protein	psRNATarget
XM_020539504.1	ncRNA:21   AUGUACACGUAAGUUUGUUCC   1   |=||*||||||||||=||||| targets:4216   UGCAAGUGCAUUCAAGCAAGG   4236 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103630114 (LOC103630114), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020539503.1	ncRNA:21   AUGUACACGUAAGUUUGUUCC   1   |=||*||||||||||=||||| targets:4428   UGCAAGUGCAUUCAAGCAAGG   4448 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103630114 (LOC103630114), transcript variant X1, mRNA	NA	coding protein	psRNATarget