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BaseInfo

ncRNA ID novel_zma_miR11343
Species Zea mays
Class miRNA
Genome position Chr1:21530645-21530694 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 27 - ACCGGACAGACACUGUAGAUUGUC - 50
Stem-loop(if miRNA) --   -    U    G         G
  CAA CUAC GUGU CUGUCCGGU U
  ||| |||| |||| |||||||||
  GUU GAUG CACA GACAGGCCA G
CU   A    U    -         U
Stem-loop sequence CAACUACUGUGUGCUGUCCGGUGUGUACCGGACAGACACUGUAGAUUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170455.1
ncRNA:24   CUGUUAGAUGUCACAGACAGGCCA   1
  ||||**||||||||*|||||||||
targets:89   GACAUGCUACAGUGGCUGUCCGGU   112

2.5 Sequence 8119 from Patent EP2559767 NA coding protein psRNATarget
HI409994.1
ncRNA:24   CUGUUAGAUGUCACAGACAGGCCA   1
  ||||**||||||||*|||||||||
targets:89   GACAUGCUACAGUGGCUGUCCGGU   112

2.5 Sequence 8119 from Patent EP2074227 NA coding protein psRNATarget
LQ242124.1
ncRNA:24   CUGUUAGAUGUCACAGACAGGCCA   1
  ||||**||||||||*|||||||||
targets:89   GACAUGCUACAGUGGCUGUCCGGU   112

2.5 Sequence 8119 from Patent EP2985353 NA coding protein psRNATarget