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BaseInfo

ncRNA ID	novel_zma_miR11338
Species	Zea mays
Class	miRNA
Genome position	Chr1:217814839-217814893 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - AAAAUUGCUUCGGAUCUGAGUGUC - 24
Stem-loop(if miRNA)	--A    UG      A   GA    CC    AAAU  CUUCGG UCU  GUGU  G    ||||  |||||| |||  ||||  U    UUUG  GGAGUC AGG  UACA  C AUG    GU      G   GG    UA
Stem-loop sequence	AAAAUUGCUUCGGAUCUGAGUGUCCGUCAUACAUGGGGAGCUGAGGUGGUUUGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT066571.1	ncRNA:24   CUGUGAGUCUAGGCUUCGUUAAAA   1   |||||||||||||||||||=|||* targets:1105   GACACUCAGAUCCGAAGCAGUUUC   1128 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0032K04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001301467.1	ncRNA:24   CUGUGAGUCUAGGCUUCGUUAAAA   1   |||||||||||||||||||=|||* targets:1105   GACACUCAGAUCCGAAGCAGUUUC   1128 Target Full Sequence	2.5	Zea mays uncharacterized LOC103635475 (LOC103635475), mRNA	NA	coding protein	psRNATarget
XM_008657939.2	ncRNA:24   CUGUGAGUCUAGGCUUCGUUAAAA   1   |||||||||||||||||||=|||* targets:2916   GACACUCAGAUCCGAAGCAGUUUC   2939 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103635475 (LOC103635475), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008657935.2	ncRNA:24   CUGUGAGUCUAGGCUUCGUUAAAA   1   |||||||||||||||||||=|||* targets:3708   GACACUCAGAUCCGAAGCAGUUUC   3731 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103635475 (LOC103635475), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008657924.2	ncRNA:24   CUGUGAGUCUAGGCUUCGUUAAAA   1   |||||||||||||||||||=|||* targets:3759   GACACUCAGAUCCGAAGCAGUUUC   3782 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103635475 (LOC103635475), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008657930.2	ncRNA:24   CUGUGAGUCUAGGCUUCGUUAAAA   1   |||||||||||||||||||=|||* targets:3785   GACACUCAGAUCCGAAGCAGUUUC   3808 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103635475 (LOC103635475), transcript variant X2, mRNA	NA	coding protein	psRNATarget