Search result

BaseInfo

ncRNA ID	osa-miRf10730-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GGUUGGUAAUACCAACCGGGA - NA
Stem-loop(if miRNA)	UU  -            AC        A        AU CU  AG UCCUGGUUGGUA  ACCAACCG GACUAAAG  C ||  || ||||||||||||  |||||||| ||||||||  A GA  UC AGGGCCAACCAU  UGGUUGGC CUGAUUUC  U   UU  U            AA        C        AA
Stem-loop sequence	CUUUAGUCCUGGUUGGUAACACCAACCGAGACUAAAGAUCAUAACUUUAGUCCCGGUUGGUAAUACCAACCGGGAUCUUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK121178.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   ||||||||||||||||||||| targets:1917   UCCCGGUUGGUAUUACCAACC   1937 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   ||=|||||||||||||||||| targets:404   UCUCGGUUGGUAUUACCAACC   424 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
AK288377.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   |||||||||||=||||||||| targets:1385   UCCCGGUUGGUGUUACCAACC   1405 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   |||||||||||=||||||||| targets:156   UCCCGGUUGGUGUUACCAACC   176 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   |||||||||||*||||||||| targets:113   UCCCGGUUGGUUUUACCAACC   133 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   |||||||||||=||||||||| targets:1839   UCCCGGUUGGUGUUACCAACC   1859 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK099726.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   |*||||||||||*|||||||| targets:1101   UACCGGUUGGUAGUACCAACC   1121 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   *|||||||||||*|||||||| targets:1378   CCCCGGUUGGUAAUACCAACC   1398 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   ||||*||||||=||||||||| targets:2397   UCCCCGUUGGUGUUACCAACC   2417 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   |=||||||||||*|||||||= targets:4   UUCCGGUUGGUAAUACCAACU   24 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
HI404518.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   |=||||||||||*|||||||= targets:4   UUCCGGUUGGUAAUACCAACU   24 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
JB164979.1	ncRNA:21   AGGGCCAACCAUAAUGGUUGG   1   |=||||||||||*|||||||= targets:4   UUCCGGUUGGUAAUACCAACU   24 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget