ncRNA ID | ath-miRf10121-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - ACCAUUGGAAAGUGCUCUAA - NA |
Stem-loop(if miRNA) |
          C     -CG            ----A    -- UCCAAGGUUUCUACAC AUGGGCCUUA AGCAC   CCAAUGGUAAGA     GAUC  U                U |||||||||| |||||   ||||||||||||     ||||  |                G UACCCGGAAU UCGUG   GGUUACCAUUCU     AUGU  U                U           C     AAA            CGUGC    AC ACAGGUACUUAUAUCG |
Stem-loop sequence | AUGGGCCUUACAGCACCGCCAAUGGUAAGAAGAUCUUCCAAGGUUUCUACACUGUGCUAUAUUCAUGGACAUCAUGUACGUGCUCUUACCAUUGGAAAGUGCUCUAAGGCCCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK317701.1 |
|
1.5 | Arabidopsis thaliana AT3G13380 mRNA, partial cds, clone: RAFL24-15-C15 | NA | coding protein | psRNATarget | |||||||||
FJ708720.1 |
|
1.5 | Arabidopsis thaliana leucine-rich repeat receptor-like protein kinase (LRR-RLK) mRNA, partial cds | NA | coding protein | psRNATarget | |||||||||
AY128280.1 |
|
1.5 | Arabidopsis thaliana AT3g13380/MRP15_1 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_112183.3 |
|
1.5 | Arabidopsis thaliana BRI1-like 3 (BRL3), mRNA | BRI1-like 3(BRL3) | coding protein | psRNATarget |