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BaseInfo

ncRNA ID ath-miRf10121-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - ACCAUUGGAAAGUGCUCUAA - NA
Stem-loop(if miRNA)           C     -CG            ----A    -- UCCAAGGUUUCUACAC
AUGGGCCUUA AGCAC   CCAAUGGUAAGA     GAUC  U                U
|||||||||| |||||   ||||||||||||     ||||  |                G
UACCCGGAAU UCGUG   GGUUACCAUUCU     AUGU  U                U
          C     AAA            CGUGC    AC ACAGGUACUUAUAUCG
Stem-loop sequence AUGGGCCUUACAGCACCGCCAAUGGUAAGAAGAUCUUCCAAGGUUUCUACACUGUGCUAUAUUCAUGGACAUCAUGUACGUGCUCUUACCAUUGGAAAGUGCUCUAAGGCCCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK317701.1
ncRNA:20   AAUCUCGUGAAAGGUUACCA   1
  ||||||||=|||||||||||
targets:1453   UUAGAGCAUUUUCCAAUGGU   1472

1.5 Arabidopsis thaliana AT3G13380 mRNA, partial cds, clone: RAFL24-15-C15 NA coding protein psRNATarget
FJ708720.1
ncRNA:20   AAUCUCGUGAAAGGUUACCA   1
  ||||||||=|||||||||||
targets:1834   UUAGAGCAUUUUCCAAUGGU   1853

1.5 Arabidopsis thaliana leucine-rich repeat receptor-like protein kinase (LRR-RLK) mRNA, partial cds NA coding protein psRNATarget
AY128280.1
ncRNA:20   AAUCUCGUGAAAGGUUACCA   1
  ||||||||=|||||||||||
targets:2423   UUAGAGCAUUUUCCAAUGGU   2442

1.5 Arabidopsis thaliana AT3g13380/MRP15_1 mRNA, complete cds NA coding protein psRNATarget
NM_112183.3
ncRNA:20   AAUCUCGUGAAAGGUUACCA   1
  ||||||||=|||||||||||
targets:2651   UUAGAGCAUUUUCCAAUGGU   2670

1.5 Arabidopsis thaliana BRI1-like 3 (BRL3), mRNA BRI1-like 3(BRL3) coding protein psRNATarget