ncRNA ID | novel_zma_miR11329 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:179385996-179386117 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUUAUUUUCGGCUGCUAGAGA - 21 |
Stem-loop(if miRNA) |
--            U           C CU    AAA       A        CG A CUA G   AUUAUUUUCGGC GCUAGAGAGUA C  CCAA   GAAUAUG UUAUUUUU  U G   G C   |||||||||||| ||||||||||| |  ||||   ||||||| ||||||||  | |   |   UAAUAAAAGCCG CGAUCUCUCAU G  GGUU   UUUAUAC AAUAAAAG  A C   C A UA            C           C AC    ---       A        AU C -AC A |
Stem-loop sequence | AUUAUUUUCGGCUGCUAGAGAGUACCCUCCAAAAAGAAUAUGAUUAUUUUUCGUAGCUAGGCAACCACCAUAGAAAAUAAACAUAUUUUUGGCAGCUACUCUCUAGCCGCCGAAAAUAAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT069780.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0232L06 mRNA, complete cds | NA | coding protein | psRNATarget |