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BaseInfo

ncRNA ID novel_zma_miR11329
Species Zea mays
Class miRNA
Genome position Chr1:179385996-179386117 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 21
Mature sequence(if miRNA) 1 - AUUAUUUUCGGCUGCUAGAGA - 21
Stem-loop(if miRNA) --            U           C CU    AAA       A        CG A CUA G
  AUUAUUUUCGGC GCUAGAGAGUA C  CCAA   GAAUAUG UUAUUUUU  U G   G C
  |||||||||||| ||||||||||| |  ||||   ||||||| ||||||||  | |   |
  UAAUAAAAGCCG CGAUCUCUCAU G  GGUU   UUUAUAC AAUAAAAG  A C   C A
UA            C           C AC    ---       A        AU C -AC A
Stem-loop sequence AUUAUUUUCGGCUGCUAGAGAGUACCCUCCAAAAAGAAUAUGAUUAUUUUUCGUAGCUAGGCAACCACCAUAGAAAAUAAACAUAUUUUUGGCAGCUACUCUCUAGCCGCCGAAAAUAAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069780.1
ncRNA:21   AGAGAUCGUCGGCUUUUAUUA   1
  *||||||=*||||||||||||
targets:1473   CCUCUAGUUGCCGAAAAUAAU   1493

2.5 Zea mays full-length cDNA clone ZM_BFb0232L06 mRNA, complete cds NA coding protein psRNATarget