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BaseInfo

ncRNA ID novel_zma_miR11322
Species Zea mays
Class miRNA
Genome position Chr9:49389569-49389669 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 78 - ACCGGACAGGCACUGUAGACUGCC - 101
Stem-loop(if miRNA) ----CA     CU    AA         C    G -   C      UAU   U
      CUGCA  GUGC  UGUCCGGUG ACCG C AGC GCGCGC   AAA C
      |||||  ||||  ||||||||| |||| | ||| ||||||   ||| C
      GAUGU  CACG  ACAGGCCAC UGGU G UUG CGCGUG   UUU A
CCGUCA     --    -G         U    G C   U      UCU   U
Stem-loop sequence CACUGCACUGUGCAAUGUCCGGUGCACCGGCAGCCGCGCGCUAUAAAUCCAUUUUUCUGUGCGCUGUUCGGUGGUUCACCGGACAGGCACUGUAGACUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170455.1
ncRNA:24   CC-GUCAGAUGUCACGGACAGGCCA   1
  ||-||**||||||||*|||||||||
targets:88   GGACAUGCUACAGUGGCUGUCCGGU   112

2.5 Sequence 8119 from Patent EP2559767 NA coding protein psRNATarget
HI409994.1
ncRNA:24   CC-GUCAGAUGUCACGGACAGGCCA   1
  ||-||**||||||||*|||||||||
targets:88   GGACAUGCUACAGUGGCUGUCCGGU   112

2.5 Sequence 8119 from Patent EP2074227 NA coding protein psRNATarget
LQ242124.1
ncRNA:24   CC-GUCAGAUGUCACGGACAGGCCA   1
  ||-||**||||||||*|||||||||
targets:88   GGACAUGCUACAGUGGCUGUCCGGU   112

2.5 Sequence 8119 from Patent EP2985353 NA coding protein psRNATarget