Search result

BaseInfo

ncRNA ID	novel_zma_miR11299
Species	Zea mays
Class	miRNA
Genome position	Chr9:38770566-38770626 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - AAGCAGAAGCUGGAACCAAACGCU - 24
Stem-loop(if miRNA)	--U         -          -----    U    GUUUGGUUC AGCUUCUGCU     CGGC U    ||||||||| ||||||||||     |||| C    CAAACCAAG UCGAAGACGA     GCCG U UCG         G          AGACC    G
Stem-loop sequence	UGUUUGGUUCAGCUUCUGCUCGGCUUCUGGCCGCCAGAAGCAGAAGCUGGAACCAAACGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550096.1	ncRNA:24   UCGCAAACCAAGGUCGAAGACGAA   1   ||||||||||||||||||=||||| targets:93   AGCGUUUGGUUCCAGCUUUUGCUU   116 Target Full Sequence	1.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At1g66345, mitochondrial (LOC103649696), mRNA	NA	coding protein	psRNATarget
JB167057.1	ncRNA:24   UCGCAAACCAAGGUCGAAGACGAA   1   *||||||||*|||||||||||||| targets:15   CGCGUUUGGCUCCAGCUUCUGCUU   38 Target Full Sequence	1.0	Sequence 4721 from Patent EP2559767	NA	coding protein	psRNATarget
HI406596.1	ncRNA:24   UCGCAAACCAAGGUCGAAGACGAA   1   *||||||||*|||||||||||||| targets:15   CGCGUUUGGCUCCAGCUUCUGCUU   38 Target Full Sequence	1.0	Sequence 4721 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238726.1	ncRNA:24   UCGCAAACCAAGGUCGAAGACGAA   1   *||||||||*|||||||||||||| targets:15   CGCGUUUGGCUCCAGCUUCUGCUU   38 Target Full Sequence	1.0	Sequence 4721 from Patent EP2985353	NA	coding protein	psRNATarget