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BaseInfo

ncRNA ID novel_zma_miR11294
Species Zea mays
Class miRNA
Genome position Chr9:61433196-61433288 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 23
Mature sequence(if miRNA) 1 - GUUAAGUUCGACGGUACUCACGU - 23
Stem-loop(if miRNA) --      GU           ------------    --GAAAAA        
  GUGGGU  CGUCGAACUUA            UGGG        UUCGACGGU
  ||||||  |||||||||||            ||||        ||||||||C
  CACUCA  GCAGCUUGAAU            ACCC        AAGCUGCCC
UG      UG           UGUAAUUCUUGC    AAAAAUUC        
Stem-loop sequence GUGGGUGUCGUCGAACUUAUGGGGAAAAAUUCGACGGUCCCCGUCGAACUUAAAAACCCACGUUCUUAAUGUUAAGUUCGACGGUACUCACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235311.1
ncRNA:23   UGCACUCAUGGCAGCUUGAAUUG   1
  |||||=||||||||||||||||=
targets:4   ACGUGGGUACCGUCGAACUUAAU   26

2.0 Sequence 1306 from Patent EP2985353 NA coding protein psRNATarget
HI403181.1
ncRNA:23   UGCACUCAUGGCAGCUUGAAUUG   1
  |||||=||||||||||||||||=
targets:4   ACGUGGGUACCGUCGAACUUAAU   26

2.0 Sequence 1306 from Patent EP2074227 NA coding protein psRNATarget
JB163642.1
ncRNA:23   UGCACUCAUGGCAGCUUGAAUUG   1
  |||||=||||||||||||||||=
targets:4   ACGUGGGUACCGUCGAACUUAAU   26

2.0 Sequence 1306 from Patent EP2559767 NA coding protein psRNATarget