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BaseInfo

ncRNA ID	novel_zma_miR11288
Species	Zea mays
Class	miRNA
Genome position	Chr9:68058024-68058076 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - UUUGAGAACAAGUGAACAACAACU - 24
Stem-loop(if miRNA)	--    -   GC           CUCG   UUGU GUU  CUUGUUCUUAA    C   |||| |||  |||||||||||   AACA CAA  GAACAAGAGUU    A UC    A   GU           UACA
Stem-loop sequence	UUGUGUUGCCUUGUUCUUAACUCGCAACAUUUGAGAACAAGUGAACAACAACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU958282.1	ncRNA:24   UC--AACAACAAGUGAACAAGAGUUU   1   ||--||||||*||||||||||||||| targets:946   AGACUUGUUGGUCACUUGUUCUCAAA   971 Target Full Sequence	1.0	Zea mays clone 1683099 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU957386.1	ncRNA:24   UC--AACAACAAGUGAACAAGAGUUU   1   ||--||||||*||||||||||||||| targets:731   AGACUUGUUGGUCACUUGUUCUCAAA   756 Target Full Sequence	1.0	Zea mays clone 1590478 mRNA sequence	NA	coding protein	psRNATarget
EZ052868.1	ncRNA:24   UCAACAACAAGUGAACAAGAGUUU   1   |*||*|||*||||||||||||||| targets:1310   AAUUAUUGAUCACUUGUUCUCAAA   1333 Target Full Sequence	1.0	TSA: Zea mays contig53989, mRNA sequence	NA	coding protein	psRNATarget
XM_008665259.2	ncRNA:24   UCAACAACAAGUGAACAAGAGUUU   1   |||-||||*|*||||||||||||| targets:1672   AGU-GUUGGUGACUUGUUCUCAAA   1694 Target Full Sequence	2.0	PREDICTED: Zea mays dof zinc finger protein DOF1.8 (LOC103641961), mRNA	NA	coding protein	psRNATarget
EU948229.1	ncRNA:24   UCAACAACAAGUGAACAAGAGUUU   1   *|*|||||*||*|||||||||||| targets:715   UGCUGUUGGUCUCUUGUUCUCAAA   738 Target Full Sequence	2.5	Zea mays clone 371607 mRNA sequence	NA	coding protein	psRNATarget
EU949314.1	ncRNA:24   UCAACAACAAGUGAACAAGAGUUU   1   |**|||||*|||||||*||||||| targets:452   AUAUGUUGGUCACUUGGUCUCAAA   475 Target Full Sequence	2.5	Zea mays clone 401002 mRNA sequence	NA	coding protein	psRNATarget