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BaseInfo

ncRNA ID novel_zma_miR11283
Species Zea mays
Class miRNA
Genome position Chr9:92974695-92974749 [-]
Reference genome RefGen_v4
Source SRR5100248;SRR5100255
Length 24
Mature sequence(if miRNA) 32 - CCCAACUGUUAGGGUUCUGAUGGU - 55
Stem-loop(if miRNA) --     -                   U
  CCCAA CUGUUAGGGUUCUGAUGGU U
  ||||| |||||||||||||||||||
  GGGUU GACAGUCUCGAGGCUGCUA C
CG     C                   G
Stem-loop sequence CCCAACUGUUAGGGUUCUGAUGGUUUCGAUCGUCGGAGCUCUGACAGCUUGGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008650945.1
ncRNA:24   UGGU--AGUCUUGGGAUUGUCAACCC   1
  *|||--||*||||||||||=||||||
targets:1025   CCCAGCUCCGAACCCUAACGGUUGGG   1050

2.5 PREDICTED: Zea mays uncharacterized LOC103629851 (LOC103629851), mRNA NA coding protein psRNATarget
EU952069.1
ncRNA:24   UGGU--AGUCUUGGGAUUGUCAACCC   1
  *|||--||*||||||||||=||||||
targets:1033   CCCAGCUCCGAACCCUAACGGUUGGG   1058

2.5 Zea mays clone 1155789 hypothetical protein mRNA, complete cds NA coding protein psRNATarget