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BaseInfo

ncRNA ID	novel_zma_miR11268
Species	Zea mays
Class	miRNA
Genome position	Chr9:152944418-152944540 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	103 - AAAUUAUAAGAAGUUUUGGCU - 123
Stem-loop(if miRNA)	--           A            -C         - G    A  U    UC    C  A   AAAUUAUAAGA GUUUUGGCUUUU  UAGAUACAU U UUUU UU UGUA  UAGA AU U   ||||||||||| ||||||||||||  ||||||||| | |||| || ||||  |||| || U   UUUAAUAUUCU UAAAACUGAAAA  AUCUAUGUA A AAAA GA ACAU  AUCU UA G GG           G            AA         U G    C  U    GA    A  G
Stem-loop sequence	AAAUUAUAAGAAGUUUUGGCUUUUCUAGAUACAUUGUUUUAUUUUGUAUCUAGACAUAUUGGAUAUCUAAGUACAUAGCAAAAGAUAUGUAUCUAAAAAAAGUCAAAAUGUCUUAUAAUUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020545934.1	ncRNA:21   UCGGUUUUGAAGAAUAUUAAA   1   |||||||||*||||||||||| targets:2184   AGCCAAAACGUCUUAUAAUUU   2204 Target Full Sequence	1.5	PREDICTED: Zea mays protein DENND6B (LOC103633980), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT086732.1	ncRNA:21   UCGGUUUUGAAGAAUAUUAAA   1   ||=||||||*||||||||||| targets:23   AGUCAAAACAUCUUAUAAUUU   43 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0242L12 mRNA, complete cds	NA	coding protein	psRNATarget
BT067253.1	ncRNA:21   UCGGUUUUGAAGAAUAUUAAA   1   **|||||||*||||||||||| targets:1372   UACCAAAACAUCUUAUAAUUU   1392 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0357C03 mRNA, complete cds	NA	coding protein	psRNATarget
BT055195.1	ncRNA:21   UCGGUUUUGAAGAAUAUUAAA   1   **|||||||*||||||||||| targets:922   UACCAAAACAUCUUAUAAUUU   942 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0132P03 mRNA, complete cds	NA	coding protein	psRNATarget
EU945560.1	ncRNA:21   UCGGUUUUGAAGAAUAUUAAA   1   |*|=|||||*||||||||||| targets:860   AACUAAAACGUCUUAUAAUUU   880 Target Full Sequence	2.5	Zea mays clone 277684 mRNA sequence	NA	coding protein	psRNATarget
BT067926.2	ncRNA:21   UCGGUUUUGAAGAAUAUUAAA   1   |*|||||=|*||||||||||| targets:1032   AACCAAAGCAUCUUAUAAUUU   1052 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0015B22 mRNA, complete cds	NA	coding protein	psRNATarget