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BaseInfo

ncRNA ID	novel_zma_miR11251
Species	Zea mays
Class	miRNA
Genome position	Chr1:146983636-146983689 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	31 - GAGUGUCUAAGUGAGCUUGAGCCU - 54
Stem-loop(if miRNA)	--    GA        -AU  -   UG G   GCUU  GAGUUUAU   GA ACU  U A   ||||  ||||||||   || |||  |   CGAG  UUCGAGUG   CU UGA  G G UC    --        AAU  G   GU U
Stem-loop sequence	GCUUGAGAGUUUAUAUGAACUUGUGAGUGUGAGUGUCUAAGUGAGCUUGAGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU961461.1	ncRNA:24   UCCGAGUUCGAGUGAAUCUGUGAG   1   ||||*|||||||||||||||*||| targets:97   AGGCACAAGCUCACUUAGACUCUC   120 Target Full Sequence	1.5	Zea mays clone 235705 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020551348.1	ncRNA:24   UCCGAGUUCGAGUGAAUCUGUGAG   1   |||-|*|||*|||||||||||||= targets:1194   AGG-UAAAGAUCACUUAGACACUU   1216 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_008678532.2	ncRNA:24   UCCGAGUUCGAGUGAAUCUGUGAG   1   |||-|*|||*|||||||||||||= targets:1496   AGG-UAAAGAUCACUUAGACACUU   1518 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_008678531.2	ncRNA:24   UCCGAGUUCGAGUGAAUCUGUGAG   1   |||-|*|||*|||||||||||||= targets:1512   AGG-UAAAGAUCACUUAGACACUU   1534 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008678530.2	ncRNA:24   UCCGAGUUCGAGUGAAUCUGUGAG   1   |||-|*|||*|||||||||||||= targets:1550   AGG-UAAAGAUCACUUAGACACUU   1572 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008678529.2	ncRNA:24   UCCGAGUUCGAGUGAAUCUGUGAG   1   |||-|*|||*|||||||||||||= targets:1556   AGG-UAAAGAUCACUUAGACACUU   1578 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100272605), transcript variant X1, mRNA	NA	coding protein	psRNATarget