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BaseInfo

ncRNA ID novel_zma_miR11246
Species Zea mays
Class miRNA
Genome position Chr9:9340677-9340756 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 20
Mature sequence(if miRNA) 61 - UUAUCGGUUUUGUGGCUCCC - 80
Stem-loop(if miRNA) --  A                G                 A
  GA CCACAAAACCGAUAAG GUUGGAGGGGCUAUAAU U
  || |||||||||||||||| |||||||||||||||||
  CU GGUGUUUUGGCUAUUC CAACCUCCCCGAUAUUA G
CC  C                G                 U
Stem-loop sequence GAACCACAAAACCGAUAAGGGUUGGAGGGGCUAUAAUAUGUAUUAUAGCCCCUCCAACGCUUAUCGGUUUUGUGGCUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU972437.1
ncRNA:20   CCCUCGGUGUUUUGGCUAUU   1
  **||||||||||||*|||||
targets:213   CUGAGCCACAAAACAGAUAA   232

2.5 Zea mays clone 381218 mRNA sequence NA coding protein psRNATarget
XM_008666609.2
ncRNA:20   CCCUCGGUGUUUUGGCUAUU   1
  **||||||||||||*|||||
targets:223   CUGAGCCACAAAACAGAUAA   242

2.5 PREDICTED: Zea mays GEM-like protein 7 (LOC103643434), mRNA NA coding protein psRNATarget