ncRNA ID | novel_zma_miR11246 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:9340677-9340756 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 20 |
Mature sequence(if miRNA) | 61 - UUAUCGGUUUUGUGGCUCCC - 80 |
Stem-loop(if miRNA) |
--  A                G                 A   GA CCACAAAACCGAUAAG GUUGGAGGGGCUAUAAU U   || |||||||||||||||| |||||||||||||||||   CU GGUGUUUUGGCUAUUC CAACCUCCCCGAUAUUA G CC  C                G                 U |
Stem-loop sequence | GAACCACAAAACCGAUAAGGGUUGGAGGGGCUAUAAUAUGUAUUAUAGCCCCUCCAACGCUUAUCGGUUUUGUGGCUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU972437.1 |
|
2.5 | Zea mays clone 381218 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_008666609.2 |
|
2.5 | PREDICTED: Zea mays GEM-like protein 7 (LOC103643434), mRNA | NA | coding protein | psRNATarget |