Search result

BaseInfo

ncRNA ID osa-miRf10721-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UCCCGAUUGGUAACACCAACCG - NA
Stem-loop(if miRNA) U     C        AAC     C     AA      
 UAGUC CGGUUGGU   ACCAA CGGGA  AAAGAUG
 ||||| ||||||||   ||||| |||||  ||||||C
 AUCAG GCCAACCA   UGGUU GCCCU  UUUCUAU
G     A        CAA     A     GA      
Stem-loop sequence UUAGUCCCGGUUGGUAACACCAACCGGGAAAAAAGAUGCUAUCUUUAGUCCCGAUUGGUAACACCAACCGAGACUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289098.1
ncRNA:22   GCCAACCACAAUGGUUAGCCCU   1
  ||||||||||||||||*|||||
targets:159   CGGUUGGUGUUACCAACCGGGA   180

1.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
AK289098.1
ncRNA:22   GCCAACCACAAUGGUUAGCCCU   1
  ||||||||*|||||||*|||||
targets:116   CGGUUGGUUUUACCAACCGGGA   137

2.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
XM_015758314.1
ncRNA:22   GCCAACCACAAUGGUUAGCCCU   1
  |||||*||||||||||*|||||
targets:918   CGGUUUGUGUUACCAACCGGGA   939

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA uncharacterized LOC107278346(LOC107278346) coding protein psRNATarget
AK065349.1
ncRNA:22   GCCAACCACAAUGGUUAGCCCU   1
  |*|||||||*||||||||||||
targets:2194   CAGUUGGUGCUACCAAUCGGGA   2215

1.5 Oryza sativa Japonica Group cDNA clone:J013022H13, full insert sequence NA coding protein psRNATarget
AK288424.1
ncRNA:22   GCCAACCACAAUGGUUAGCCCU   1
  |||||*||||||||||*|||||
targets:2393   CGGUUAGUGUUACCAACCGGGA   2414

2.5 Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence NA coding protein psRNATarget
AK288405.1
ncRNA:22   GCCAACCACAAUGGUUAGCCCU   1
  |*||||||||||||||*|||||
targets:2400   CCGUUGGUGUUACCAACCGGGA   2421

1.5 Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence NA coding protein psRNATarget