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BaseInfo

ncRNA ID	novel_zma_miR11238
Species	Zea mays
Class	miRNA
Genome position	Chr9:83793790-83793855 [+]
Reference genome	RefGen_v4
Source	SRR5100248;SRR5105959;SRR5105961
Length	21
Mature sequence(if miRNA)	1 - UCGGGAUUGAAGAGGAUUGGA - 21
Stem-loop(if miRNA)	--            AG     GA A A     A   UCGGGAUUGAAG  GAUUG  G G AAAUU G   ||||||||||||  |||||  | | |||||   AGCCUUAACUUU  CUAAC  C C UUUAA U GA            CU     UC A G     U
Stem-loop sequence	UCGGGAUUGAAGAGGAUUGGAGAGAAAAUUAGUUAAUUUGCACCUCAAUCUCUUUCAAUUCCGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU942844.1	ncRNA:21   AGGUUAGGAGAAGUUAGGGCU   1   *=||||||||||||||||||| targets:200   CUCAAUCCUCUUCAAUCCCGA   220 Target Full Sequence	0.0	Zea mays clone 1540330 mRNA sequence	NA	coding protein	psRNATarget
EZ069159.1	ncRNA:21   AGGUUAGGAGAAGUUAGGGCU   1   ||||||||*|||||||||||| targets:63   UCCAAUCCCCUUCAAUCCCGA   83 Target Full Sequence	1.5	TSA: Zea mays contig04794, mRNA sequence	NA	coding protein	psRNATarget
XM_020551942.1	ncRNA:21   AGGUUAGGAGAAGUUAGGGCU   1   *=|||||=||||=|||||||| targets:87   CUCAAUCUUCUUUAAUCCCGA   107 Target Full Sequence	2.5	PREDICTED: Zea mays leucine-rich repeat receptor protein kinase EMS1-like (LOC109945626), mRNA	NA	coding protein	psRNATarget