ncRNA ID | novel_zma_miR11236 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:72039563-72039638 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248;SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACUGUAACGCCCUGAAUUUGGG - 24 |
Stem-loop(if miRNA) |
----AAACU         U          -U    UUUUU          GUAACGCCC GAAUUUGGGG  AGAA     U          ||||||||| ||||||||||  ||||          CAUUGCGGG CUUAAACCUC  UCUU     C CUUUUCUCU         -          UC    UUCUU |
Stem-loop sequence | AAACUGUAACGCCCUGAAUUUGGGGUAGAAUUUUUUCUUCUUUUCUCUCUCCAAAUUCGGGCGUUACUCUCUUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020539096.1 |
|
2.5 | PREDICTED: Zea mays AP3-complex subunit beta-A (LOC100383432), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001351147.1 |
|
2.5 | Zea mays AP3-complex subunit beta-A (LOC100383432), mRNA | NA | coding protein | psRNATarget |