ncRNA ID | novel_zma_miR11232 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:142232494-142232554 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAGGUACCUGAGCGCGCAACGCC - 24 |
Stem-loop(if miRNA) |
--A      C     C     -   -         UAGGUA CUGAG GCGCA ACG CCUUGA    |||||| ||||| ||||| ||| |||||G    AUCUAU GACUC CGUGU UGC GGAAUC UAG      C     C     A   A      |
Stem-loop sequence | AUAGGUACCUGAGCGCGCAACGCCUUGAGCUAAGGACGUAUGUGCCCUCAGCUAUCUAGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU969222.1 |
|
1.0 | Zea mays clone 327027 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_008661405.2 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC103638507 (LOC103638507), mRNA | NA | coding protein | psRNATarget | |||||||||
BT019125.1 |
|
2.5 | Zea mays clone Contig739.F mRNA sequence | NA | coding protein | psRNATarget |