ncRNA ID | novel_zma_miR11225 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:140188194-140188317 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUUCGUCGGCCACUGAGGUCGA - 24 |
Stem-loop(if miRNA) |
--          G  --   G                CA                 -  AUAU   AUUUUCGUCG CC  ACU AGGUCGACGAAAAUAG  GUUAUUUUCGUGGGCCG CU    U   |||||||||| ||  ||| ||||||||||||||||  ||||||||||||||||| ||    U   UAAAAGCAGC GG  UGA UCCAGCUGCUUUUAUC  CAAUAAAAGCACCCGGC GG    U CA          A  AC   A                UC                 C  CUGC |
Stem-loop sequence | AUUUUCGUCGGCCACUGAGGUCGACGAAAAUAGCAGUUAUUUUCGUGGGCCGCUAUAUUUUCGUCGGCCGGCCCACGAAAAUAACCUCUAUUUUCGUCGACCUAAGUCAGGACGACGAAAAUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020541648.1 |
|
3.0 | PREDICTED: Zea mays extensin-like (LOC103634127), mRNA | NA | coding protein | psRNATarget |