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BaseInfo

ncRNA ID novel_zma_miR11222
Species Zea mays
Class miRNA
Genome position Chr8:21243922-21244006 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - CUUAAAAGUGUGGCGCGGUGUGGC - 24
Stem-loop(if miRNA) --                                    AC A
  CACACCGCGCCACACUUUUAAGCCACAAGUGUGGCG  C A
  ||||||||||||||||||||||||||||||||||||  | A
  GUGUGGCGCGGUGUGAAAAUUCGGUGUUCACACCGC  G U
CG                                    CA C
Stem-loop sequence CACACCGCGCCACACUUUUAAGCCACAAGUGUGGCGACCAAAUCGACCGCCACACUUGUGGCUUAAAAGUGUGGCGCGGUGUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008676327.2
ncRNA:24   CGGUGUGGCGCGGUGUGAAAA-UUC   1
  |||||||||||||||||||||-|||
targets:1777   GCCACACCGCGCCACACUUUUCAAG   1801

3.0 PREDICTED: Zea mays crossover junction endonuclease MUS81 (LOC103650756), mRNA NA coding protein psRNATarget