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BaseInfo

ncRNA ID	novel_zma_miR11216
Species	Zea mays
Class	miRNA
Genome position	Chr8:53278155-53278272 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - GUAGAAAUCGAUUUCUAGUGACGG - 24
Stem-loop(if miRNA)	--GC            UU      G    C   C    U          UG             CACUAGAAAUCG  UUUCUA AGGU GUU CUUA GAAAACCGCC  UAGAAAUCU     ||||||||||||  |||||| |||| ||| |||| ||||||||||  ||||||||A     GUGAUCUUUAGC  AAAGAU UCCG CAA GAAU CUUUUGGCGG  AUCUUUAGU GGCA            -U      G    C   U    U          UG
Stem-loop sequence	GCCACUAGAAAUCGUUUUUCUAGAGGUCGUUCCUUAUGAAAACCGCCUGUAGAAAUCUAUGAUUUCUAGUGGCGGUUUUCUUAAGUAACCGCCUGUAGAAAUCGAUUUCUAGUGACGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163558.1	ncRNA:24   GGCAGUGAUCUUUAGCUAAAGAUG   1   *||*||||||||||=||||||||| targets:37   GCGCCACUAGAAAUUGAUUUCUAC   60 Target Full Sequence	1.5	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget
HI403097.1	ncRNA:24   GGCAGUGAUCUUUAGCUAAAGAUG   1   *||*||||||||||=||||||||| targets:37   GCGCCACUAGAAAUUGAUUUCUAC   60 Target Full Sequence	1.5	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235227.1	ncRNA:24   GGCAGUGAUCUUUAGCUAAAGAUG   1   *||*||||||||||=||||||||| targets:37   GCGCCACUAGAAAUUGAUUUCUAC   60 Target Full Sequence	1.5	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget
HI407102.1	ncRNA:19   UGAUCUUUAGCUAAAGAUG   1   **||||||||||||||||| targets:1   UAUAGAAAUCGAUUUCUAC   19 Target Full Sequence	2.0	Sequence 5227 from Patent EP2074227	NA	coding protein	psRNATarget
JB167563.1	ncRNA:19   UGAUCUUUAGCUAAAGAUG   1   **||||||||||||||||| targets:1   UAUAGAAAUCGAUUUCUAC   19 Target Full Sequence	2.0	Sequence 5227 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239232.1	ncRNA:19   UGAUCUUUAGCUAAAGAUG   1   **||||||||||||||||| targets:1   UAUAGAAAUCGAUUUCUAC   19 Target Full Sequence	2.0	Sequence 5227 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020549239.1	ncRNA:24   GGCAGUGAUCUUUAGCUAAAGAUG   1   *****|||=*|||||||||||||| targets:3   GGUGAACUGUAAAUCGAUUUCUAC   26 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized mitochondrial protein AtMg00810-like (LOC109944459), mRNA	NA	coding protein	psRNATarget