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BaseInfo

ncRNA ID	novel_zma_miR11214
Species	Zea mays
Class	miRNA
Genome position	Chr8:61991456-61991527 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	1 - UUUAAACCCCUCCAAUCCCCU - 21
Stem-loop(if miRNA)	--             A           C A     A   GGGAUUGGAGGGG UUAAAUCCCCU C AGUUA A   ||||||||||||| ||||||||||| | |||||   CCCUAACCUCCCC AAUUUAGGGGA G UCAGU A UC             A           A A     A
Stem-loop sequence	GGGAUUGGAGGGGAUUAAAUCCCCUCCAAGUUAAAAAUGACUAGAAGGGGAUUUAAACCCCUCCAAUCCCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ095217.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   =|||||||||||||||||||| targets:63   GGGGGAUUGGAGGGGUUUAAA   83 Target Full Sequence	0.0	TSA: Zea mays contig30870, mRNA sequence	NA	coding protein	psRNATarget
XM_020542872.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   =|||||||||||||||||||| targets:1294   GGGGGAUUGGAGGGGUUUAAA   1314 Target Full Sequence	0.0	PREDICTED: Zea mays LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3 (LOC103634808), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020540164.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   =|||||||||||||||||||| targets:1546   GGGGGAUUGGAGGGGUUUAAA   1566 Target Full Sequence	0.0	PREDICTED: Zea mays Cysteine-rich repeat secretory protein 3 (LOC107521955), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT085111.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   |||||||||||||||*||||| targets:1283   AGGGGAUUGGAGGGGAUUAAA   1303 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0292J13 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020552749.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   =||||||||||||||*||||| targets:3215   GGGGGAUUGGAGGGGAUUAAA   3235 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
EU968801.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   ||||*|||||||||||||||* targets:471   AGGGUAUUGGAGGGGUUUAAU   491 Target Full Sequence	2.0	Zea mays clone 324211 protein transport protein SEC61 gamma subunit mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157439.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   ||||*|||||||||||||||* targets:471   AGGGUAUUGGAGGGGUUUAAU   491 Target Full Sequence	2.0	Zea mays protein transport protein SEC61 gamma subunit (LOC100284544), mRNA	NA	coding protein	psRNATarget
LQ235121.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   |||*|||||||||||*||||| targets:25   AGGAGAUUGGAGGGGAUUAAA   45 Target Full Sequence	2.5	Sequence 1116 from Patent EP2985353	NA	coding protein	psRNATarget
JB163452.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   |||*|||||||||||*||||| targets:25   AGGAGAUUGGAGGGGAUUAAA   45 Target Full Sequence	2.5	Sequence 1116 from Patent EP2559767	NA	coding protein	psRNATarget
HI402991.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   |||*|||||||||||*||||| targets:25   AGGAGAUUGGAGGGGAUUAAA   45 Target Full Sequence	2.5	Sequence 1116 from Patent EP2074227	NA	coding protein	psRNATarget
BT041883.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   ||*||||||||||||*||||| targets:812   AGCGGAUUGGAGGGGAUUAAA   832 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073E14 mRNA, complete cds	NA	coding protein	psRNATarget
BT062257.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   ||*||||||||||||*||||| targets:1111   AGCGGAUUGGAGGGGAUUAAA   1131 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0234J14 mRNA, complete cds	NA	coding protein	psRNATarget
EU975659.1	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   ||*||||||||||||*||||| targets:2140   AGCGGAUUGGAGGGGAUUAAA   2160 Target Full Sequence	2.5	Zea mays clone 495563 ankyrin protein kinase-like mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158998.2	ncRNA:21   UCCCCUAACCUCCCCAAAUUU   1   ||*||||||||||||*||||| targets:2141   AGCGGAUUGGAGGGGAUUAAA   2161 Target Full Sequence	2.5	Zea mays Ankyrin protein kinase-like (LOC100279910), mRNA	NA	coding protein	psRNATarget