ncRNA ID | novel_zma_miR11202 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:111488458-111488580 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100248;SRR2089698 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AACACAUGAAAAACACAGGAU - 21 |
Stem-loop(if miRNA) |
---   C       C         U             --  GG   --------         CAC    CUG GUUUUUC UGUGUUUUU AACUAAUUCCUGU  AA  GCU        UCUAUGAAA   A    ||| ||||||| ||||||||| |||||||||||||  ||  |||        |||||||||    GAC CAAAAAG ACACAAAAA UUGAUUAAGGACA  UU  UGA        AGAUAUUUU   A UAG   A       U         C             AU  AA   UAUGGUAA         AAG |
Stem-loop sequence | CUGCGUUUUUCCUGUGUUUUUUAACUAAUUCCUGUAAGGGCUUCUAUGAAACACAAGAAUUUUAUAGAAAUGGUAUAGUAAUUUAACAGGAAUUAGUUCAAAAACACAUGAAAAACACAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008654414.2 |
|
1.0 | PREDICTED: Zea mays translation initiation factor IF-2 (LOC103632658), mRNA | NA | coding protein | psRNATarget |