Search result

BaseInfo

ncRNA ID novel_zma_miR11202
Species Zea mays
Class miRNA
Genome position Chr8:111488458-111488580 [-]
Reference genome RefGen_v4
Source SRR5100248;SRR2089698
Length 21
Mature sequence(if miRNA) 1 - AACACAUGAAAAACACAGGAU - 21
Stem-loop(if miRNA) ---   C       C         U             --  GG   --------         CAC
   CUG GUUUUUC UGUGUUUUU AACUAAUUCCUGU  AA  GCU        UCUAUGAAA   A
   ||| ||||||| ||||||||| |||||||||||||  ||  |||        |||||||||
   GAC CAAAAAG ACACAAAAA UUGAUUAAGGACA  UU  UGA        AGAUAUUUU   A
UAG   A       U         C             AU  AA   UAUGGUAA         AAG
Stem-loop sequence CUGCGUUUUUCCUGUGUUUUUUAACUAAUUCCUGUAAGGGCUUCUAUGAAACACAAGAAUUUUAUAGAAAUGGUAUAGUAAUUUAACAGGAAUUAGUUCAAAAACACAUGAAAAACACAGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654414.2
ncRNA:21   UAGGACACAAAAAGUACACAA   1
  *||||*|||||||||||||||
targets:903   UUCCUAUGUUUUUCAUGUGUU   923

1.0 PREDICTED: Zea mays translation initiation factor IF-2 (LOC103632658), mRNA NA coding protein psRNATarget