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BaseInfo

ncRNA ID novel_zma_miR11200
Species Zea mays
Class miRNA
Genome position Chr8:127724502-127724573 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - AAUUAAUUUAAUUGUCGUCGGCCC - 24
Stem-loop(if miRNA) --        G        -  C  C       CGC
  GCCGACGA AAUUAAGU AA UC CGUCGGC   C
  |||||||| |||||||| || || |||||||   U
  CGGCUGCU UUAAUUUA UU AG GCAGUCG   A
CC        G        A  A  A       AUC
Stem-loop sequence GCCGACGAGAAUUAAGUAACUCCCGUCGGCCGCCUACUAGCUGACGAGAAUUAAUUUAAUUGUCGUCGGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ060577.1
ncRNA:24   CCCGGCUGCUGUUAAUUUAAUUAA   1
  **||=||*||*||||||||||||*
targets:319   UUGCUGAGGAAAAUUAAAUUAAUA   342

3.0 TSA: Zea mays contig61699, mRNA sequence NA coding protein psRNATarget