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BaseInfo

ncRNA ID novel_zma_miR11197
Species Zea mays
Class miRNA
Genome position Chr8:133284633-133284689 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - ACCGAGAGUAGAACUUUGCCGAGU - 24
Stem-loop(if miRNA) --   --     C          CA    C
  UCG  AGAGU CUGCUCUCGG  AACG G
  |||  ||||| ||||||||||  ||||
  AGC  UUUCA GAUGAGAGCC  UUGU A
UG   CG     A          -A    U
Stem-loop sequence UCGAGAGUCCUGCUCUCGGCAAACGCGAUUGUUACCGAGAGUAGAACUUUGCCGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241867.1
ncRNA:24   UGAGCCGUUUCAAGAUGAGAGCCA   1
  ||||||||*|||*|||||||||||
targets:1   ACUCGGCAUAGUCCUACUCUCGGU   24

2.5 Sequence 7862 from Patent EP2985353 NA coding protein psRNATarget
HI409737.1
ncRNA:24   UGAGCCGUUUCAAGAUGAGAGCCA   1
  ||||||||*|||*|||||||||||
targets:1   ACUCGGCAUAGUCCUACUCUCGGU   24

2.5 Sequence 7862 from Patent EP2074227 NA coding protein psRNATarget
JB170198.1
ncRNA:24   UGAGCCGUUUCAAGAUGAGAGCCA   1
  ||||||||*|||*|||||||||||
targets:1   ACUCGGCAUAGUCCUACUCUCGGU   24

2.5 Sequence 7862 from Patent EP2559767 NA coding protein psRNATarget