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BaseInfo

ncRNA ID	novel_zma_miR11195
Species	Zea mays
Class	miRNA
Genome position	Chr8:21507993-21508041 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	26 - AUGACACUCGGCAAAGUAUACUUU - 49
Stem-loop(if miRNA)	--AA                  UA     UAUACUUUGCCGAGUGUC  G     ||||||||||||||||||  A     AUAUGAAACGGCUCACAG  G UUUC                  UA
Stem-loop sequence	AAUAUACUUUGCCGAGUGUCUAGAGAUGACACUCGGCAAAGUAUACUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT067215.1	ncRNA:24   UUUCAUAUGAAACGGCUCACAGUA   1   ||||*||||||||||||||||||| targets:1438   AAAGCAUACUUUGCCGAGUGUCAU   1461 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0310H18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175109.1	ncRNA:24   UUUCAUAUGAAACGGCUCACAGUA   1   ||||*||||||||||||||||||| targets:1575   AAAGCAUACUUUGCCGAGUGUCAU   1598 Target Full Sequence	0.0	Zea mays 1-aminocyclopropane-1-carboxylate oxidase2 (cl955_1), mRNA	NA	coding protein	psRNATarget
BT064046.1	ncRNA:24   UUUCAUAUGAAACGGCUCACAGUA   1   ||||*||||||||||||||||||| targets:1575   AAAGCAUACUUUGCCGAGUGUCAU   1598 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0133L10 mRNA, complete cds	NA	coding protein	psRNATarget
LQ238622.1	ncRNA:24   UUUCAUAUGAAACGGCUCACAGUA   1   ||||*=||||*||||||||||||* targets:21   AAAGCGUACUGUGCCGAGUGUCAG   44 Target Full Sequence	3.0	Sequence 4617 from Patent EP2985353	NA	coding protein	psRNATarget
HI406492.1	ncRNA:24   UUUCAUAUGAAACGGCUCACAGUA   1   ||||*=||||*||||||||||||* targets:21   AAAGCGUACUGUGCCGAGUGUCAG   44 Target Full Sequence	3.0	Sequence 4617 from Patent EP2074227	NA	coding protein	psRNATarget
JB166953.1	ncRNA:24   UUUCAUAUGAAACGGCUCACAGUA   1   ||||*=||||*||||||||||||* targets:21   AAAGCGUACUGUGCCGAGUGUCAG   44 Target Full Sequence	3.0	Sequence 4617 from Patent EP2559767	NA	coding protein	psRNATarget
EU952231.1	ncRNA:24   UUUCAUAUGAAACGGCUCACAGUA   1   |||--|||||||||||||||||** targets:1442   AAA--AUACUUUGCCGAGUGUCCA   1463 Target Full Sequence	2.5	Zea mays clone 1234152 mRNA sequence	NA	coding protein	psRNATarget
EU961427.1	ncRNA:24   UUUCAUAUGAAACGGCUCACAGUA   1   ||||*||*||||||||||*||||| targets:338   AAAGGAUUCUUUGCCGAGAGUCAU   361 Target Full Sequence	2.5	Zea mays clone 235362 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget