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BaseInfo

ncRNA ID	novel_zma_miR11192
Species	Zea mays
Class	miRNA
Genome position	Chr8:147529922-147529970 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	23
Mature sequence(if miRNA)	1 - UGACACUCGGCAAAGAAACUCUU - 23
Stem-loop(if miRNA)	--   -C              UG A   GAG  UCUUUGCCGAGUGU  U U   |||  ||||||||||||||  |   CUC  AGAAACGGCUCACA  G U UU   AA              GU U
Stem-loop sequence	GAGCUCUUUGCCGAGUGUUGUAUUUGUGACACUCGGCAAAGAAACUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ240695.1	ncRNA:23   UUCUCAAAGAAACGGCUCACAGU   1   ***||*|||||||||||||||=| targets:1   CUUAGGUUCUUUGCCGAGUGUUA   23 Target Full Sequence	2.5	Sequence 6690 from Patent EP2985353	NA	coding protein	psRNATarget
JB169026.1	ncRNA:23   UUCUCAAAGAAACGGCUCACAGU   1   ***||*|||||||||||||||=| targets:1   CUUAGGUUCUUUGCCGAGUGUUA   23 Target Full Sequence	2.5	Sequence 6690 from Patent EP2559767	NA	coding protein	psRNATarget
HI408565.1	ncRNA:23   UUCUCAAAGAAACGGCUCACAGU   1   ***||*|||||||||||||||=| targets:1   CUUAGGUUCUUUGCCGAGUGUUA   23 Target Full Sequence	2.5	Sequence 6690 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:23   UUCUCAAAGAAACGGCUCACAGU   1   *|*||*|||||||||||||||*| targets:177   UAUAGGUUCUUUGCCGAGUGUAA   199 Target Full Sequence	2.5	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
HI406962.1	ncRNA:23   UUCUCAAAGAAACGGCUCACAGU   1   *|*||*|||||||||||||||*| targets:177   UAUAGGUUCUUUGCCGAGUGUAA   199 Target Full Sequence	2.5	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget
JB167423.1	ncRNA:23   UUCUCAAAGAAACGGCUCACAGU   1   *|*||*|||||||||||||||*| targets:177   UAUAGGUUCUUUGCCGAGUGUAA   199 Target Full Sequence	2.5	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
BT067215.1	ncRNA:23   UUCUCAA--AGAAACGGCUCACAGU   1   ==**|||--|||||||||||||||| targets:1356   GGCCGUUAGUCUUUGCCGAGUGUCA   1380 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0310H18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175109.1	ncRNA:23   UUCUCAA--AGAAACGGCUCACAGU   1   ==**|||--|||||||||||||||| targets:1493   GGCCGUUAGUCUUUGCCGAGUGUCA   1517 Target Full Sequence	2.5	Zea mays 1-aminocyclopropane-1-carboxylate oxidase2 (cl955_1), mRNA	NA	coding protein	psRNATarget
BT064046.1	ncRNA:23   UUCUCAA--AGAAACGGCUCACAGU   1   ==**|||--|||||||||||||||| targets:1493   GGCCGUUAGUCUUUGCCGAGUGUCA   1517 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0133L10 mRNA, complete cds	NA	coding protein	psRNATarget
LQ238815.1	ncRNA:23   UUCUCAAAGAAACGGCUCACAGU   1   *|*||*|||||||||||||||*| targets:40   UAUAGGUUCUUUGCCGAGUGUAA   62 Target Full Sequence	2.5	Sequence 4810 from Patent EP2985353	NA	coding protein	psRNATarget
JB167146.1	ncRNA:23   UUCUCAAAGAAACGGCUCACAGU   1   *|*||*|||||||||||||||*| targets:40   UAUAGGUUCUUUGCCGAGUGUAA   62 Target Full Sequence	2.5	Sequence 4810 from Patent EP2559767	NA	coding protein	psRNATarget
HI406685.1	ncRNA:23   UUCUCAAAGAAACGGCUCACAGU   1   *|*||*|||||||||||||||*| targets:40   UAUAGGUUCUUUGCCGAGUGUAA   62 Target Full Sequence	2.5	Sequence 4810 from Patent EP2074227	NA	coding protein	psRNATarget
HI406041.1	ncRNA:23   UUC---UCAAAGAAACGGCUCACAGU   1   *||---||*|*||||||||||||||* targets:133   CAGCGAAGCUACUUUGCCGAGUGUCU   158 Target Full Sequence	3.0	Sequence 4166 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238171.1	ncRNA:23   UUC---UCAAAGAAACGGCUCACAGU   1   *||---||*|*||||||||||||||* targets:133   CAGCGAAGCUACUUUGCCGAGUGUCU   158 Target Full Sequence	3.0	Sequence 4166 from Patent EP2985353	NA	coding protein	psRNATarget
JB166502.1	ncRNA:23   UUC---UCAAAGAAACGGCUCACAGU   1   *||---||*|*||||||||||||||* targets:133   CAGCGAAGCUACUUUGCCGAGUGUCU   158 Target Full Sequence	3.0	Sequence 4166 from Patent EP2559767	NA	coding protein	psRNATarget