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BaseInfo

ncRNA ID	novel_zma_miR11185
Species	Zea mays
Class	miRNA
Genome position	Chr8:161649810-161649929 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	23
Mature sequence(if miRNA)	1 - UCACUUAACAAGUUCAAGGACCU - 23
Stem-loop(if miRNA)	--   UC A               ACA     ------------------     GA  --AUG     A   GUC  U AACUUGUUAAGUGGC   ACACA                  GUGGU  GU     GUCCA A   |||  | |||||||||||||||   |||||                  |||||  ||     |||||   CAG  A UUGAACAAUUCACUG   UGUGU                  UACCA  UA     CAGGU A UC   GA C               CAC     GUAGGGAUUUGAAUAUUU     AG  GUGUA     A
Stem-loop sequence	GUCUCUAAACUUGUUAAGUGGCACAACACAGUGGUGAGUAUGGUCCAAAAAUGGACAUGUGAUGAACCAUUUUAUAAGUUUAGGGAUGUGUGUCACGUCACUUAACAAGUUCAAGGACCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU962359.1	ncRNA:23   UCCAGGAACUUGAACAAUUCACU   1   |||||||||||||||||||*||| targets:125   AGGUCCUUGAACUUGUUAAAUGA   147 Target Full Sequence	1.5	Zea mays clone 242021 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150240.1	ncRNA:23   UCCAGGAACUUGAACAAUUCACU   1   |||||||||||||||||||*||| targets:125   AGGUCCUUGAACUUGUUAAAUGA   147 Target Full Sequence	1.5	Zea mays hypothetical protein (LOC100276452), mRNA	NA	coding protein	psRNATarget
LQ238997.1	ncRNA:23   UCCAGGAACUUGAACAAUUCACU   1   |**||||||||||||||||*||| targets:14   AUAUCCUUGAACUUGUUAAAUGA   36 Target Full Sequence	1.5	Sequence 4992 from Patent EP2985353	NA	coding protein	psRNATarget
HI406867.1	ncRNA:23   UCCAGGAACUUGAACAAUUCACU   1   |**||||||||||||||||*||| targets:14   AUAUCCUUGAACUUGUUAAAUGA   36 Target Full Sequence	1.5	Sequence 4992 from Patent EP2074227	NA	coding protein	psRNATarget
JB167328.1	ncRNA:23   UCCAGGAACUUGAACAAUUCACU   1   |**||||||||||||||||*||| targets:14   AUAUCCUUGAACUUGUUAAAUGA   36 Target Full Sequence	1.5	Sequence 4992 from Patent EP2559767	NA	coding protein	psRNATarget