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BaseInfo

ncRNA ID	novel_zma_miR11174
Species	Zea mays
Class	miRNA
Genome position	Chr8:156734175-156734274 [+]
Reference genome	RefGen_v4
Source	SRR5100248;SRR5100255
Length	24
Mature sequence(if miRNA)	77 - ACCGGACAGGCACUGUAGAUUGUC - 100
Stem-loop(if miRNA)	----CA     CU    A      A      --   -    C     C C   UC       CUGCA  GUGC CUGUCC GUGCAU  CGG CAGC GCACG G AGA  C       |||||  |||| |||||| ||||||  ||| |||| ||||| | |||       GAUGU  CACG GACAGG CACGUG  GCC GUCG CGUGU C UCU  C CUGUUA     --    -      C      UG   U    -     C -   UC
Stem-loop sequence	CACUGCACUGUGCACUGUCCAGUGCAUCGGCAGCCGCACGCGCAGAUCCCCUUCUCCUGUGCGCUGUCCGGUGUGCACCGGACAGGCACUGUAGAUUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ242124.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   ||||**||||||||*||||||||| targets:89   GACAUGCUACAGUGGCUGUCCGGU   112 Target Full Sequence	2.5	Sequence 8119 from Patent EP2985353	NA	coding protein	psRNATarget
JB170455.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   ||||**||||||||*||||||||| targets:89   GACAUGCUACAGUGGCUGUCCGGU   112 Target Full Sequence	2.5	Sequence 8119 from Patent EP2559767	NA	coding protein	psRNATarget
HI409994.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   ||||**||||||||*||||||||| targets:89   GACAUGCUACAGUGGCUGUCCGGU   112 Target Full Sequence	2.5	Sequence 8119 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008650945.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   |||||***|||||||||||||||| targets:1068   GACAAGGAACAGUGCCUGUCCGGU   1091 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103629851 (LOC103629851), mRNA	NA	coding protein	psRNATarget
EU952069.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   |||||***|||||||||||||||| targets:1076   GACAAGGAACAGUGCCUGUCCGGU   1099 Target Full Sequence	3.0	Zea mays clone 1155789 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget