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BaseInfo

ncRNA ID osa-miRf10714-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGCUCGAGCAGCUCACGAGC - NA
Stem-loop(if miRNA)      --       AC  A  A        C U     ---   --   CACGAGCUUGGAGGCAGGCUUGAGCUC
AAUCU  AGGCUCG  GA CU UUCGAGCU G CUCGU   CAA  GCU                           G
|||||  |||||||  || || |||||||| | |||||   |||  |||
UUAGA  UCCGAGC  CU GA GAGCUCGA C GAGCG   CUG  CUG                           G
     GC       -A  C  C        A C     AUG   AG   AGCUCGAACUGAGCACUUAUUAGGCUU
Stem-loop sequence AAUCUAGGCUCGACGAACUAUUCGAGCUCGUCUCGUCAAGCUCACGAGCUUGGAGGCAGGCUUGAGCUCGGUUCGGAUUAUUCACGAGUCAAGCUCGAGUCGAGUCGUAGCGAGCCAAGCUCGAGCAGCUCACGAGCCUCGAGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015773991.1
ncRNA:20   CGAGCACUCGACGAGCUCGA   1
  ||||||||||*|||||||||
targets:1802   GCUCGUGAGCAGCUCGAGCU   1821

1.5 PREDICTED: Oryza sativa Japonica Group serine/arginine repetitive matrix protein 1 (LOC4332074), mRNA serine/arginine repetitive matrix protein 1(LOC4332074) coding protein psRNATarget
CT830337.1
ncRNA:20   CGAGCACUCGACGAGCUCGA   1
  *||||*|||||||||*||||
targets:851   UCUCGCGAGCUGCUCCAGCU   870

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN014H21, full insert sequence NA coding protein psRNATarget
AK073953.1
ncRNA:20   CGAGCACUCGACGAGCUCGA   1
  *||||*|||||||||*||||
targets:570   UCUCGCGAGCUGCUCCAGCU   589

2.5 Oryza sativa Japonica Group cDNA clone:J033076G17, full insert sequence NA coding protein psRNATarget
AK060355.1
ncRNA:20   CGAGCACUCGACGAGCUCGA   1
  *||||*|||||||||*||||
targets:610   UCUCGCGAGCUGCUCCAGCU   629

2.5 Oryza sativa Japonica Group cDNA clone:001-008-G09, full insert sequence NA coding protein psRNATarget
XM_015761008.1
ncRNA:20   CGAGCACUCGACGAGCUCGA   1
  *||||*|||||||||*||||
targets:765   UCUCGCGAGCUGCUCCAGCU   784

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4351207 (LOC4351207), mRNA uncharacterized LOC4351207(LOC4351207) coding protein psRNATarget
AK060197.1
ncRNA:20   CGAGCACUCGACGAGCUCGA   1
  *||||*|||||||||*||||
targets:682   UCUCGCGAGCUGCUCCAGCU   701

2.5 Oryza sativa Japonica Group cDNA clone:001-001-F05, full insert sequence NA coding protein psRNATarget