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BaseInfo

ncRNA ID novel_zma_miR11166
Species Zea mays
Class miRNA
Genome position Chr8:125166257-125166306 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 22
Mature sequence(if miRNA) 1 - UUUCCAUCAAUCCUGGCAUCAC - 22
Stem-loop(if miRNA) --      UC       G   CA  A
  UUUCCA  AAUCCUG CAU  CG A
  ||||||  ||||||| |||  ||
  AAAGGU  UUAGGAC GUA  GC U
GC      -U       -   AC  G
Stem-loop sequence UUUCCAUCAAUCCUGGCAUCACGAAUGCGCAAUGCAGGAUUUUGGAAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020548888.1
ncRNA:22   CACUACGGUCCUAACUACCUUU   1
  |||||||||||||||||||=||
targets:416   GUGAUGCCAGGAUUGAUGGGAA   437

1.5 PREDICTED: Zea mays 50S ribosomal protein L2, chloroplastic-like (LOC109944200), mRNA NA coding protein psRNATarget