Search result

BaseInfo

ncRNA ID osa-miRf10713-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CAGGGAGGGGAGAGUCGUGUUU - NA
Stem-loop(if miRNA) CGCA         ---G  -          -G    -AU  --G  A  G UC    GC
    CAGGGAGGG    AG AGUCGUGUUU  CCGG   GC   CC UU G  CAUU  A
    |||||||||    || ||||||||||  ||||   ||   || || |  ||||
    GUCUCUCCU    UC UCGGCACGGG  GGCC   CG   GG AA C  GUAA  G
GCUA         AGCA  G          AG    CGU  ACA  C  G GA    AA
Stem-loop sequence CGCACAGGGAGGGGAGAGUCGUGUUUGCCGGAUGCGCCAUUGGUCCAUUGCAGAAAAUGAGCGAACGGACAGCUGCCCGGGAGGGCACGGCUGCUACGAUCCUCUCUGAUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK073090.1
ncRNA:22   UUUG-UGCUGAGAGGGGAGGGAC   1
  *|||-||||||||||||||||||
targets:347   UAACUACGACUCUCCCCUCCCUG   369

2.0 Oryza sativa Japonica Group cDNA clone:J033022L24, full insert sequence NA coding protein psRNATarget
CT832429.1
ncRNA:22   UUUGUGCUGAGAGGGGAGG-GAC   1
  ***||||||||||||||||-|||
targets:676   CUCCACGACUCUCCCCUCCUCUG   698

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108B03, full insert sequence NA coding protein psRNATarget