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BaseInfo

ncRNA ID	novel_zma_miR11155
Species	Zea mays
Class	miRNA
Genome position	Chr8:97429054-97429158 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	25
Mature sequence(if miRNA)	81 - GUUUUUGGACUCCCAAACUAGCCCU - 105
Stem-loop(if miRNA)	--              -   C      G             GG     UAAGG   GGCUAGUUUGGGAG CCA AAAACU GAGGGGAUUGGAG  GCUAA     A   |||||||||||||| ||| |||||| |||||||||||||  |||||     G   CCGAUCAAACCCUC GGU UUUUGG UUCCCCUAAUCUC  CGAUU     G UC              A   -      A             UA     UUAGG
Stem-loop sequence	GGCUAGUUUGGGAGCCACAAAACUGGAGGGGAUUGGAGGGGCUAAUAAGGAGGGGAUUUUAGCAUCUCUAAUCCCCUUAGGUUUUUGGACUCCCAAACUAGCCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550478.1	ncRNA:25   UCCCGAUCAAACCCUCAGGUUUUUG   1   ||||||||||||*|||||||||||| targets:2078   AGGGCUAGUUUGAGAGUCCAAAAAC   2102 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103651221 (LOC103651221), mRNA	NA	coding protein	psRNATarget
NM_001137967.1	ncRNA:25   UCCCGAUCAAACCCUCAGGUUUUUG   1   *||||||||||*||||||||||||| targets:1295   UGGGCUAGUUUUGGAGUCCAAAAAC   1319 Target Full Sequence	1.0	Zea mays uncharacterized LOC100192771 (AY111680), mRNA	NA	coding protein	psRNATarget
BT034839.1	ncRNA:25   UCCCGAUCAAACCCUCAGGUUUUUG   1   *||||||||||*||||||||||||| targets:1295   UGGGCUAGUUUUGGAGUCCAAAAAC   1319 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0022H05 mRNA, complete cds	NA	coding protein	psRNATarget
EU960786.1	ncRNA:25   UCCCGAUCAAACCCUCAGGUUUUUG   1   *||||||||||*||||||||||||| targets:1208   UGGGCUAGUUUUGGAGUCCAAAAAC   1232 Target Full Sequence	1.0	Zea mays clone 228656 mRNA sequence	NA	coding protein	psRNATarget
XM_008683144.2	ncRNA:25   UCCCGAUCAAACCCUCAGGUUUUUG   1   *||||||||||*||||||||||||| targets:1265   UGGGCUAGUUUUGGAGUCCAAAAAC   1289 Target Full Sequence	1.0	PREDICTED: Zea mays Synaptotagmin-2 (AY111680), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU956908.1	ncRNA:25   UCCCGAUCAAACCCUCAGGUUUUUG   1   **|||||||||||*||||||||||| targets:941   CCGGCUAGUUUGGAAGUCCAAAAAC   965 Target Full Sequence	1.5	Zea mays clone 1577150 mRNA sequence	NA	coding protein	psRNATarget
XM_008654952.2	ncRNA:25   UCCCGAUCAAACCCUCAGGUUUUUG   1   ||*||||||||*||||||||||||= targets:2452   AGAGCUAGUUUAGGAGUCCAAAAAU   2476 Target Full Sequence	2.0	PREDICTED: Zea mays cysteine-rich receptor-like protein kinase 10 (LOC103633255), mRNA	NA	coding protein	psRNATarget
BT063389.1	ncRNA:25   UCC------CGAUCAAACCCUCAGGUUUUUG   1   |||------|||||||||||||||*|||||* targets:1466   AGGAUUAAAGCUAGUUUGGGAGUCAAAAAAA   1496 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0059C06 mRNA, complete cds	NA	coding protein	psRNATarget