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BaseInfo

ncRNA ID	novel_zma_miR11149
Species	Zea mays
Class	miRNA
Genome position	Chr8:106226813-106226982 [+]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	147 - GGUUCAGAUUAGAAGUUUACACGG - 170
Stem-loop(if miRNA)	--                                          G    GUAGAGGAGUGGG     G    GAAAAAGUGUAAUUAGCAGU   GUGUAAACUUCUAAUCUGAACCACAUGAUGUUGAUCCAAGGG ACGU             AGGGG AUUU                    G   |||||||||||||||||||||||||||||||||||||||||| ||||             ||||| ||||   CACAUUUGAAGAUUAGACUUGGUGUACUACAACUAGGUUCCU UGCG             UCCCC CACC                    G GG                                          -    -------------     G    UAUUAAAAUGUGAAUUGGCG
Stem-loop sequence	GUGUAAACUUCUAAUCUGAACCACAUGAUGUUGAUCCAAGGGGACGUGUAGAGGAGUGGGAGGGGGAUUUGAAAAAGUGUAAUUAGCAGUGGGCGGUUAAGUGUAAAAUUAUCCACGCCCCUGCGUUCCUUGGAUCAACAUCAUGUGGUUCAGAUUAGAAGUUUACACGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU960978.1	ncRNA:24   GGCACAUUUGAAGAUUAGACUUGG   1   =||||*||||||||||||||*||| targets:828   UCGUGCAAACUUCUAAUCUGUACC   851 Target Full Sequence	2.5	Zea mays clone 230113 mRNA sequence	NA	coding protein	psRNATarget
XM_008676928.2	ncRNA:24   GGCACAUUUGAAGAUUAGACUUGG   1   ||*||*||||||*||||||||||| targets:2811   CCAUGCAAACUUAUAAUCUGAACC   2834 Target Full Sequence	2.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At3g09650, chloroplastic (LOC103651307), mRNA	NA	coding protein	psRNATarget
LQ235257.1	ncRNA:19   AUUUGAAGAUUAGACUUGG   1   *||||||=||||||||||| targets:1   CAAACUUUUAAUCUGAACC   19 Target Full Sequence	2.5	Sequence 1252 from Patent EP2985353	NA	coding protein	psRNATarget
JB163588.1	ncRNA:19   AUUUGAAGAUUAGACUUGG   1   *||||||=||||||||||| targets:1   CAAACUUUUAAUCUGAACC   19 Target Full Sequence	2.5	Sequence 1252 from Patent EP2559767	NA	coding protein	psRNATarget
HI403127.1	ncRNA:19   AUUUGAAGAUUAGACUUGG   1   *||||||=||||||||||| targets:1   CAAACUUUUAAUCUGAACC   19 Target Full Sequence	2.5	Sequence 1252 from Patent EP2074227	NA	coding protein	psRNATarget