ncRNA ID | novel_zma_miR11142 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:39542920-39543015 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 73 - AGCAGUGAUUCCGUCGAUUUGGGC - 96 |
Stem-loop(if miRNA) |
--                AA    A   ---C   C      --G -    U   CCAAAUCGACGGAAUC  ACUG UUG    GCA GGAAUU   C AACC C   ||||||||||||||||  |||| |||    ||| ||||||   | ||||   GGUUUAGCUGCCUUAG  UGAC AGC    CGU CCUUAG   G UUGG C CG                --    G   ACCU   C      UCA C    A |
Stem-loop sequence | CCAAAUCGACGGAAUCAAACUGAUUGCGCACGGAAUUGCAACCUCCAGGUUCGACUGAUUCCCUGCUCCACGAGCAGUGAUUCCGUCGAUUUGGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU957985.1 |
|
0.0 | Zea mays clone 1639296 mRNA sequence | NA | coding protein | psRNATarget |