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BaseInfo

ncRNA ID novel_zma_miR11142
Species Zea mays
Class miRNA
Genome position Chr7:39542920-39543015 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 73 - AGCAGUGAUUCCGUCGAUUUGGGC - 96
Stem-loop(if miRNA) --                AA    A   ---C   C      --G -    U
  CCAAAUCGACGGAAUC  ACUG UUG    GCA GGAAUU   C AACC C
  ||||||||||||||||  |||| |||    ||| ||||||   | ||||
  GGUUUAGCUGCCUUAG  UGAC AGC    CGU CCUUAG   G UUGG C
CG                --    G   ACCU   C      UCA C    A
Stem-loop sequence CCAAAUCGACGGAAUCAAACUGAUUGCGCACGGAAUUGCAACCUCCAGGUUCGACUGAUUCCCUGCUCCACGAGCAGUGAUUCCGUCGAUUUGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU957985.1
ncRNA:24   CGGGUUUAGCUGCCUUAGUGACGA   1
  *|||||||||||||||||||||||
targets:54   CCCCAAAUCGACGGAAUCACUGCU   77

0.0 Zea mays clone 1639296 mRNA sequence NA coding protein psRNATarget