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BaseInfo

ncRNA ID	novel_zma_miR11138
Species	Zea mays
Class	miRNA
Genome position	Chr1:96857110-96857158 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	23
Mature sequence(if miRNA)	1 - CACCCGGCUGUUGGAUUCUGACC - 23
Stem-loop(if miRNA)	--C      C   UG  --   UG     ACCCGG UGU  GA  UUC  AC    |||||| |||  ||  |||  |C    UGGGUC ACA  CU  GAG  UG CAC      U   GU  UC   GU
Stem-loop sequence	CACCCGGCUGUUGGAUUCUGACCGUUGGAGCUUCUGACAUCUGGGUCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT062647.2	ncRNA:23   CCAGUCUUAGGUUGUCGGCCCAC   1   ***|||||||||=|||||||||* targets:232   ACGCAGAAUCCAGCAGCCGGGUA   254 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0327N12 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008668815.2	ncRNA:23   CCAGUCUUAGGUUGUCGGCCCAC   1   ***|||||||||=|||||||||* targets:740   ACGCAGAAUCCAGCAGCCGGGUA   762 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100191495 (AY112075), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT062742.1	ncRNA:23   CCAGUCUUAGGUUGUCGGCCCAC   1   ***|||||||||=|||||||||* targets:507   ACGCAGAAUCCAGCAGCCGGGUA   529 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0340I04 mRNA, complete cds	NA	coding protein	psRNATarget
BT033592.1	ncRNA:23   CCAGUCUUAGGUUGUCGGCCCAC   1   ***|||||||||=|||||||||* targets:611   ACGCAGAAUCCAGCAGCCGGGUA   633 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0244F15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001136927.1	ncRNA:23   CCAGUCUUAGGUUGUCGGCCCAC   1   ***|||||||||=|||||||||* targets:611   ACGCAGAAUCCAGCAGCCGGGUA   633 Target Full Sequence	2.5	Zea mays uncharacterized LOC100191495 (AY112075), mRNA	NA	coding protein	psRNATarget
XM_008668813.2	ncRNA:23   CCAGUCUUAGGUUGUCGGCCCAC   1   ***|||||||||=|||||||||* targets:740   ACGCAGAAUCCAGCAGCCGGGUA   762 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100191495 (AY112075), transcript variant X1, mRNA	NA	coding protein	psRNATarget