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BaseInfo

ncRNA ID novel_zma_miR11127
Species Zea mays
Class miRNA
Genome position Chr7:34213790-34213942 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - AAACAAUUCGGAACCUCUGAGCCU - 24
Stem-loop(if miRNA) --   G      --    -         ------------    ----   G   U      -   U      --CC   UG  ---  U
  GCU CGGAGG  CUGA UUGUUUCUU            GGGG    CGG AGC GGGUAG CGG UGGGUG    GGC  CU   GC G
  ||| ||||||  |||| |||||||||            ||||    ||| ||| |||||| ||| ||||||    |||  ||   ||
  CGA GUCUCC  GGCU AACAAAGAG            CCCC    GUC UCG UCCGUC GUC ACCCAC    CCG  GG   CG C
UC   -      AA    U         UGUUAGUCUCGU    AAAA   G   -      C   U      UAGU   GU  AGU  U
Stem-loop sequence GCUGCGGAGGCUGAUUGUUUCUUGGGGCGGGAGCUGGGUAGCGGUUGGGUGCCGGCUGCUGCUGCUGCUGAGGUGGCCUGAUCACCCAUCUGCCUGCCUGCUGCUGAAAACCCCUGCUCUGAUUGUGAGAAACAAUUCGGAACCUCUGAGCCU